Package: pedigreeTools 0.2

Paulino Perez Rodriguez

pedigreeTools: Versatile Functions for Working with Pedigrees

Tools to sort, edit and prune pedigrees and to extract the inbreeding coefficients and the relationship matrix (includes code for pedigrees from self-pollinated species). The use of pedigree data is central to genetics research within the animal and plant breeding communities to predict breeding values. The relationship matrix between the individuals can be derived from pedigree structure ('Vazquez et al., 2010') <doi:10.2527/jas.2009-1952>.

Authors:Ana I. Vazquez, Douglas M. Bates, Paulino Perez-Rodriguez, G. de los Campos, S. Avadhanam & Gregor Gorjanc

pedigreeTools_0.2.tar.gz
pedigreeTools_0.2.zip(r-4.4)pedigreeTools_0.2.zip(r-4.3)
pedigreeTools_0.2.tgz(r-4.4-x86_64)pedigreeTools_0.2.tgz(r-4.4-arm64)pedigreeTools_0.2.tgz(r-4.3-x86_64)pedigreeTools_0.2.tgz(r-4.3-arm64)
pedigreeTools_0.2.tar.gz(r-4.4-noble)
pedigreeTools_0.2.tgz(r-4.4-emscripten)pedigreeTools_0.2.tgz(r-4.3-emscripten)
pedigreeTools.pdf |pedigreeTools.html
pedigreeTools/json (API)

# Install 'pedigreeTools' in R:
install.packages('pedigreeTools', repos = c('https://rpedigree.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rpedigree/pedigreetools/issues

On CRAN:

Conda:

4.69 score 11 stars 15 scripts 314 downloads 19 exports 2 dependencies

Last updated 1 years agofrom:a1c07cc8b8. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 04 2025
R-4.4-win-x86_64OKMar 04 2025
R-4.4-mac-x86_64OKMar 04 2025
R-4.4-mac-aarch64OKMar 04 2025
R-4.4-linux-x86_64OKMar 04 2025
R-4.3-win-x86_64OKMar 04 2025
R-4.3-mac-x86_64OKMar 04 2025
R-4.3-mac-aarch64OKMar 04 2025

Exports:DmateditPedgetAgetAInvgetASelfinggetASubsetgetDgetDInvgetGenAncestorsgetLgetLInvgetTgetTInvinbreedingped2DFpedigreeprunePedrelfactorrelfactorInv

Dependencies:latticeMatrix